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Table 2 Differences of methylation levels (%) between patients with and without CarAC

From: CDKN2B methylation is associated with carotid artery calcification in ischemic stroke patients

Gene

Position

CarAC

p value

With

Without

CDKN2A

1

4.4 (3.0–6.0)

4.1 (2.7–5.9)

0.480

2

7.1 (5.3–8.9)

6.7 (5.4–8.5)

0.520

3

8.2 (6.8–10.7)

8.0 (6.3–9.6)

0.130

4

5.8 (4.2–8.0)

5.8 (4.3–7.7)

0.896

5

4.8 (4.0–5.5)

5.1 (4.1–5.5)

0.181

6

2.7 (2.3–3.4)

2.7 (2.3–3.2)

0.592

7

2.3 (1.9–2.8)

2.2 (1.7–2.8)

0.062

8

4.3 (3.8–5.0)

4.4 (3.6–5.2)

0.598

9

4.4 (2.4–8.2)

4.4 (2.5–7.7)

0.845

10

2.1 (1.0–3.2)

1.8 (0.9–3.0)

0.377

11

3.7 (2.5–4.9)

3.5 (2.3–5.0)

0.679

12

0.9 (0.5–1.3)

0.9 (0.6–1.4)

0.745

13

1.2 (0.9–1.5)

1.3 (1.0–1.5)

0.325

14

1.2 (1.0–1.5)

1.2 (0.9–1.4)

0.468

15

2.1 (1.7–2.3)

2.0 (1.6–2.5)

0.482

16

1.3 (1.0–1.7)

1.3 (1.0–1.7)

0.800

17

3.3 (2.7–4.2)

3.1 (2.6–3.5)

0.001

18

2.2 (1.7–2.6)

2.2 (1.8–2.6)

0.937

19

2.5 (2.0–3.0)

2.5 (2.0–2.9)

0.806

20

2.7 (2.1–3.3)

2.7 (2.3–3.2)

0.615

21

15.6 (13.6–17.8)

15.3 (13.9–16.8)

0.511

22

2.5 (2.0–3.1)

2.6 (2.1–3.2)

0.425

23

4.3 (3.5–5.1)

4.3 (3.5–5.0)

0.983

24

1.7 (1.2–2.5)

1.8 (1.3–2.5)

0.449

Average

4.0 (3.6–4.3)

3.9 (3.6–4.2)

0.277

CDKN2B

1

5.5 (4.5–6.4)

5.2 (4.2–6.1)

0.046

2

4.4 (3.4–5.3)

4.3 (3.3–5.2)

0.395

3

3.8 (3.1–4.9)

4.0 (3.1–4.6)

0.890

4

4.2 (3.4–5.1)

4.1 (3.3–4.8)

0.233

5

7.6 (6.6–8.9)

7.2 (6.3–8.1)

0.002

6

6.9 (5.7–8.2)

6.5 (5.3–7.4)

0.009

7

8.3 (7.1–9.6)

7.5 (6.7–8.2)

<0.001

8

3.5 (2.9–4.2)

3.3 (2.9–3.7)

0.039

9

4.0 (3.3–4.5)

3.6 (3.0–4.1)

<0.001

10

6.1 (5.2–7.1)

5.6 (4.6–6.3)

<0.001

11

7.5 (6.3–8.7)

6.8 (6.0–7.8)

0.007

12

5.7 (4.9–6.7)

5.4 (4.6–6.0)

0.009

Average

5.7 (5.0–6.4)

5.4 (4.7–5.9)

0.001

  1. Statistically signficant values are in italics
  2. For each CpG site, p < 0.05/36 after Bonferroni correction, and p < 0.025 for average levels