Skip to main content

Table 2 SNP panel composition and genotyping results

From: Buffy coat specimens remain viable as a DNA source for highly multiplexed genome-wide genetic tests after long term storage

dbSNP rs number) ABI TaqMan Assay Identifier Genome Location Samples Genotyped Missing Genotypes (%)
rs7792547 c_29193799_10 Chr7: 150754462 117 4 (3.4%)
rs7326634 c_306605_10 Chr13: 85638600 117 1 (0.85%)
rs1293288 C_8339785_10 Chr8: 11755937 117 0 (0%)
rs6935566 c_29104855_10 Chr6: 149608518 117 1 (0.85%)
rs2251110 c_8793799_20 Chr15: 31385829 117 0 (0%)
rs2118922 c_15975275_10 Chr4: 178404068 117 2 (1.7%)
  1. The table lists the dbSNP rs number, ABI identifier, genome location, number of samples assayed, and the missing genotype count and proportion for the 6 SNPs assayed by TaqMan genotyping. (ABI or Applied Biosystems Inc, is now part of Life Technologies).