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Table 2 List of proteins identified after OFFGEL and SDS-PAGE fractionation, tryptic digest, and MALDI-TOF MS analysis

From: Proteomic detection of a large amount of SCGFα in the stroma of GISTs after imatinib therapy

No.

AC 1

DE 2

Mw 3

pI 4

Cov 5

1

P01009

Alpha-1-antitrypsin

44

5.4

47

2

P04217

Alpha-1B-glycoprotein

52

5.6

38

3

P02750

Leucine-rich alpha-2-glycoprotein

34

5.7

22

4

P01023

Alpha-2-macroglobulin

161

5.9

28

5

P01011

Alpha-1-antichymotrypsin

45

5.3

32

6

P60709

Actin, cytoplasmic 1

42

5.3

65

7

P63261

Actin, cytoplasmic 2

42

5.3

65

8

P43652

Afamin

67

5.6

42

9

P02768

Serum albumin

66

5.7

66

10

P01008

Antithrombin-III

49

6.0

30

11

P08758

Annexin A5

36

4.9

69

12

P02647

Apolipoprotein A-I

28

5.3

74

13

P06727

Apolipoprotein A-IV

43

5.2

43

14

P00450

Ceruloplasmin

120

5.4

15

15

P00751

Complement factor B

83

6.7

36

16

P08603

Complement factor H

137

6.1

46

17

P01024

Complement C3

185

6.0

11

18

P0C0L4

Complement C4b-A

84

5.3

21

19

P0C0L5

Complement C4b-B

84

5.4

21

20

P02765

Alpha-2-HS-glycoprotein chain A

30

4.5

32

21

P02679

Fibrinogen gamma chain

48

5.2

33

22

P02792

Ferritin light chain

20

5.5

45

23

P68871

Hemoglobin subunit beta

16

6.8

84

24

P00738

Haptoglobin

43

6.1

40

25

P08238

Heat shock protein HSP 90-beta

83

5.0

24

26

P07900

Heat shock protein HSP 90-alpha

85

4.9

18

27

P01876

Ig alpha-1 chain C region

38

6.1

29

28

P01857

Ig gamma-1 chain C region

36

8.5

28

29

P01859

Ig gamma-2 chain C region

36

7.7

26

30

P19827

Inter-alpha-trypsin inhibitor heavy chain

71

6.3

17

31

P13645

Keratin, type I cytoskeletal 10

60

5.1

24

32

P35527

Keratin, type I cytoskeletal 9

62

5.2

16

33

P04264

Keratin, type II cytoskeletal 1

66

8.2

26

34

P01042

Kininogen-1

70

6.2

22

35

P00734

Prothrombin

65

5.2

50

36

P02787

Serotransferrin

75

6.7

47

37

P02766

Transthyretin

14

5.4

80

38

P02774

Vitamin D-binding protein

51

5.2

53

39

P25311

Zinc-alpha-2-glycoprotein

32

5.6

22

  1. 1 Swiss-Prot/TrEMBL accession line.
  2. 2 Swiss-Prot/TrEMBL description line.
  3. 3 Theoretical protein mass.
  4. 4 Theoretical protein isoelectric point.
  5. 5 Number of amino acids present in at least one peptide over the number of amino acids of the protein.