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Table 1 Primers/probe for quantification of -families (modified from [10], TaqMan).

From: Relative quantification of TCR Vbeta-chain families by real time PCR for identification of clonal T-cell populations

Primer

Sequence (5' – 3')

HBV1.1

CAC TCT GAA CTA AAC CTG A

HBV2

TCA ACC ATG CAA GCC TGA CC

HBV3

CGC TTC TCC CTG ATT CTG GAG TCC

HBV4

TTC CCA TCA GCC GCC CAA ACC TA

HBV5A

CTG AGA TGA ATG TGA GCA CCT TG

HBV5B

CTG AGC TGA ATG TGA ACG CCT TG

HBV6A

AGA TCC AGC GCA CAG AGC G

HBV6B

AGA TCC AGC GCA CAS AGC A

HBV7

GCC AAG TCG CTT CTC ACC TG

HBV8

TGA AGA TCC AGC CCT CAG AAC CC

HBV9

TCT CAC CTA AAT CTC CAG ACA AAG

HBV10

CCA CGG AGT CAG GGG ACA CA

HBV11

TGC CAG GCC CTC ACA TAC CTC TCA

HBV12A

GAG AAT TTC CTC CTC ACT CTG G

HBV12B

GAC CTC CCC CTC ACT CTG G

HBV13A

CTC AGG CTG CTG TCG GCT G

HBV13B

CTC AGG CTG GAG TTG GCT G

HBV14

AGG GTA CAA AGT CTC TCG AAA AG

HBV15

CAG GCA CAG GCT AAA TTC TCC

HBV16

GAA CTG GAG GAT TCT GGA GT

HBV17

GAA GGG TAC AGC GTC TCT CGG

HBV18

TTT CTG CTG AAT TTC CCA AAG AGG

HBV19

TCT CAA TGC CCC AAG AAC GCA C

HBV20

AGG TGC CCC AGA ATC TCT CAG

HBV21

TCA AAG GAG TAG ACT CCA CTC TC

HBV22

AGA TCC GGT CCA CAA AGC TG

HBV23

ATT CTG AAC TGA ACA TGA GCT CCT

HBV24

ATC CAG GAG GCC GAA CAC TTC

HBCTP-FAM

FAM-ATG GCT CAA ACA CAG CGA CCT CGG-TAMRA

HBC-rev

GGT GTG GGA GAT CTC TGC TTC

  1. FAM: 6-carboxyfluorescin; TAMRA: 6-carboxytetramethylrhodamine, S: C or G