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Table 4 The 16 mis-classified samples

From: Diagnosis of drug-induced renal tubular toxicity using global gene expression profiles

A_id

Animal

Treatment

Cpd.Dose.Day

H_score

B_class

SVM_value

Class_predicted

TRUE/FALSE

84

2021

Tobramycin

Tob.060.03

0

-1

0.053417599

1

FALSE

80

2017

Tobramycin

Tob.030.14

0

-1

0.020981321

1

FALSE

36

2071

HCB

HCB.040.03

0

-1

0.3853432

1

FALSE

5

2117

Allopurinol

All.030.03

0

-1

0.4184979

1

FALSE

6

2118

Allopurinol

All.030.03

0

-1

0.33539873

1

FALSE

7

2119

Allopurinol

All.030.03

0

-1

0.079393616

1

FALSE

8

2120

Allopurinol

All.030.03

0

-1

0.40372499

1

FALSE

17

2142

Allopurinol

All.100.07

1

1

-0.33466752

-1

FALSE

19

2143

Allopurinol

All.100.07

1

1

-0.25854402

-1

FALSE

104

2408

Vehicle

Veh.000.03

1

1

-1.4422447

-1

FALSE

121

2413

Vehicle

Veh.000.14

1

1

-1.277754

-1

FALSE

128

1940

Vehicle

Veh.000.14

1

1

-1.2135719

-1

FALSE

116

1936

Vehicle

Veh.000.07

1

1

-1.1563262

-1

FALSE

54

1962

Puromycin

Pur.020.03

2

1

-1.0786993

-1

FALSE

63

1971

Puromycin

Pur.020.14

2

1

-1.3810734

-1

FALSE

61

1969

Puromycin

Pur.020.14

3

1

-0.056223804

-1

FALSE

  1. The mis-classified samples by SVM in Charles River Laboratories studies are listed here. Columns are: A_id, animal identification; Treatment, compound; Cpd.Dose.Day, compound.dose.day; H_score, histopathology grade; B_class, designated SVM class label for testing; SVM value, the prediction value from SVM model (>0 indicates positive class and <0 indicates negative class); class_predicted, predicted class label; Prediction, prediction true or false.