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Table 4 The 16 mis-classified samples

From: Diagnosis of drug-induced renal tubular toxicity using global gene expression profiles

A_id Animal Treatment Cpd.Dose.Day H_score B_class SVM_value Class_predicted TRUE/FALSE
84 2021 Tobramycin Tob.060.03 0 -1 0.053417599 1 FALSE
80 2017 Tobramycin Tob.030.14 0 -1 0.020981321 1 FALSE
36 2071 HCB HCB.040.03 0 -1 0.3853432 1 FALSE
5 2117 Allopurinol All.030.03 0 -1 0.4184979 1 FALSE
6 2118 Allopurinol All.030.03 0 -1 0.33539873 1 FALSE
7 2119 Allopurinol All.030.03 0 -1 0.079393616 1 FALSE
8 2120 Allopurinol All.030.03 0 -1 0.40372499 1 FALSE
17 2142 Allopurinol All.100.07 1 1 -0.33466752 -1 FALSE
19 2143 Allopurinol All.100.07 1 1 -0.25854402 -1 FALSE
104 2408 Vehicle Veh.000.03 1 1 -1.4422447 -1 FALSE
121 2413 Vehicle Veh.000.14 1 1 -1.277754 -1 FALSE
128 1940 Vehicle Veh.000.14 1 1 -1.2135719 -1 FALSE
116 1936 Vehicle Veh.000.07 1 1 -1.1563262 -1 FALSE
54 1962 Puromycin Pur.020.03 2 1 -1.0786993 -1 FALSE
63 1971 Puromycin Pur.020.14 2 1 -1.3810734 -1 FALSE
61 1969 Puromycin Pur.020.14 3 1 -0.056223804 -1 FALSE
  1. The mis-classified samples by SVM in Charles River Laboratories studies are listed here. Columns are: A_id, animal identification; Treatment, compound; Cpd.Dose.Day, compound.dose.day; H_score, histopathology grade; B_class, designated SVM class label for testing; SVM value, the prediction value from SVM model (>0 indicates positive class and <0 indicates negative class); class_predicted, predicted class label; Prediction, prediction true or false.