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Table 2 Genes of known association with melanoma

From: Melanoma-restricted genes

Clone ID

Chromosomal Location

Name

AVERAGE

t-test (p2-value)

   

RCC

MEL

Other

RCC vs MEL

MEL vs Other

Cluster a

       

2569910

Xp11.2

MAGED2

-0.22

0.4

-0.28

7.10E-03

8.00E-07

316397

Xp11.2

MAGED2

-0.24

0.41

-0.29

5.60E-04

3.00E-07

P24478

Xp11.2

MAGED2

-0.21

0.31

-0.22

5.10E-03

1.00E-06

Cluster d

       

1735474

Xq26

MAGEC1

0.03

0.25

-0.26

3.40E-02

6.80E-06

131595

Xq28

MAGEA10

-0.03

0.28

-0.24

6.20E-02

1.80E-04

1505360

Xq28

MAGEA2

-0.88

0.94

-0.76

6.00E-12

2.00E-10

Cluster e

       

781233

2p23.3

POMC

-0.03

0.17

-0.15

2.20E-01

1.40E-05

Cluster g

       

897956

22q11.22

PRAME

-0.62

1.33

-1.05

1.60E-06

1.00E-18

853789

9p23

TYRP1

-0.82

0.59

-0.3

7.70E-06

8.00E-04

768344

9p23

TYRP1

-0.7

0.8

-0.61

1.60E-07

1.80E-06

40056

15q23

CSPG4

-0.32

0.69

-0.53

2.20E-04

2.70E-09

P07338

n.a.

CSPG4

-0.63

0.78

-0.61

8.50E-05

5.70E-09

2447688

11q23.3

MCAM

0.21

0.69

-0.6

8.70E-02

3.40E-09

1585510

3q28-q29

MFI2 (p97)

-0.48

0.59

-0.44

1.10E-03

5.70E-07

Cluster i

       

P30563

n.a.

CD63

-0.66

0.7

-0.44

8.20E-08

1.90E-09

1631546

Xq28

MAGEA6

-0.55

0.35

-0.22

1.30E-08

5.60E-04

291448

12q13-q1

SILV (gp100)

-1.31

1.55

-1.16

4.90E-16

5.00E-15

271985

11q14-q2 || TYR

Tyrosinase

-1.37

1.73

-1.38

6.30E-18

2.90E-18

272327

9p24.1

Melan-A

-0.76

1.19

-0.95

2.40E-08

1.80E-16

269124

9p24.1

Melan-A

-0.65

1.21

-0.99

5.30E-09

2.70E-16