Resource | Information type | Number of nodes | Number of associations |
---|---|---|---|
BioBridge omics network 2012 | BioBridge 8w training extended by protein and metabolite measurements | 4878 | 11448 |
Co-morbidity network | Co-morbidity network from OMIM gene-disease associations as well as Medicare and Swedish health system patient data | 8 435 | 3 973 126 |
COPD literature mining | GWAS and epigenetic gene- disease associations | 18 | 20 |
Disease grouping | Expert-based manual grouping of diseases | 493 diseases | 27 groups |
Human angiogenesis young, old | Public, angiogenesis-related expression data | 3691 | 3782 |
ICD 9 | International classification of disease, ninth revision | 13 222 | |
ICD 10 | International classification of disease, tenth revision | 12 416 | |
ITFP | Transcription factors and targets | 2 143 TF, 6 710 targets | 74 907 |
MeSH | Medical subject headings | 24 767 | |
miRbase | micro RNA | 2024 human miRNA | |
miRTarBase | microRNA targets | 12 194 human targets | 38 311 |
Mouse inactivity-induced muscle wasting | Public mouse, inactivity-induced muscle wasting data gene expression GSE25908, | 15 287 | 154 597 |
PAC-COPD | Clinical study | 342 patients, 260 clinical attributes | |
Pathway network | Jaccard index based clustering of pathways from KEGG, Reactome and the BioBridge COPD text mining | 1138 pathways | 1815 associations |
SNOMED-CT | Systematized Nomenclature of Medicine -- Clinical Terms | 296 519 |