Targets | Directions | Sequences | Notes |
---|---|---|---|
Real-time PCR Primers: | |||
Ad-Endo (290 bp) | Forward | 5′-TGACTGCCTCCAAGTAGGCTAGA-3′ | Within the Endostatin fragment |
Reverse | 5′-CCCAGATCCGCGTTAAGA-3′ | At the junction of the poly_A signal and the Ad backbone | |
dl 1520 (264 bp) | Forward | 5′-TGTTTCCAGAACTGAGACGCAT-3′ | E1B region (Ad2/2261-2281 nt) |
Reverse | 5′ –TCTCATCGTACCTCAGCACCTT-3′ | E1B region (Ad2 3330–3351 nt) | |
Total Ad (237 bp) | Forward | 5′-TCGAAGCCGTTGATGTTGTG-3′ | E2B (Ad2/7519-7538 nt or Ad5/7529-7548 nt) |
Reverse | 5′- GGCCATAGGTCGCCAGTTTA-3′ | E2B (Ad2/7519-7538 nt or Ad5/7529-7548 nt) | |
β-Actin (266 bp) | Forward | 5′-CCTTTCCTTCCCAGGGCGTGAT-3′ | At the intron 2-exon 3 junction |
Reverse | 5′-CGGGCCACTCACCTGGGTCAT-3′ | Within the exon 3 | |
p53 (298 bp) | Forward | 5′-GTGGTGGTGCCCTATGAG-3′ |  |
Reverse | 5′-AGGAGCTGGTGTTGTTGG-3′ |  | |
p14ARF (282 bp) | Forward | 5′-CGCGAGTGAGGGTTTTCGT-3′ |  |
Reverse | 5′-CAGCACCACCAGCGTGTCC-3′ |  | |
GAPDH (258 bp) | Forward | 5′-AGAAGGCTGGGGCTCATTTG -3′ |  |
Reverse | 5′-AGGGGCCATCCACAGTCTTC-3′ |  | |
Cloning primers (for cloning into HindIII/EcoRI site of pcDNA3.1(+)): | |||
Ad E1A | Forward | 5′-cccaagctt CGGGACTGAAAATGAGAC-3′ | E1A gene (Ad2 548 nt – 1554 nt) (942 bp) |
Reverse | 5′- ccggaattc CAGGTTTACACCTTATGGC-3′ | ||
Ad E1B19k | Forward | 5′-cccaagctt ATCTTGGTTACATCTGACCTC-3′ | E1B19 kDa (Ad2 1690 nt – 2255 nt) (566 bp) |
Reverse | 5′-ccggaattc AGCCACCTGTACAACATTC-3′ | ||
Ad E1A + E1B19k | Forward | 5′-cccaagctt CGGGACTGAAAATGAGAC-3′ | E1A+E1B19 kDa (Ad2 548 nt – 2255 nt) (1708 bp) |
Reverse | 5′-ccggaattc AGCCACCTGTACAACATTC-3′ |